GE CodeLink Human Inflammation 16 Bioarray annotation data (chip hi16cod)


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Documentation for package ‘hi16cod.db’ version 2.9.0

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hi16cod Bioconductor annotation data package
hi16cod.db Bioconductor annotation data package
hi16codACCNUM Map Manufacturer identifiers to Accession Numbers
hi16codALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hi16codCHR Map Manufacturer IDs to Chromosomes
hi16codCHRLENGTHS A named vector for the length of each of the chromosomes
hi16codCHRLOC Map Manufacturer IDs to Chromosomal Location
hi16codCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hi16codENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hi16codENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hi16codENTREZID Map between Manufacturer Identifiers and Entrez Gene
hi16codENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
hi16codENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
hi16codGENENAME Map between Manufacturer IDs and Genes
hi16codGO Map between Manufacturer IDs and Gene Ontology (GO)
hi16codGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hi16codGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
hi16codLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hi16codMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hi16codMAPCOUNTS Number of mapped keys for the maps in package hi16cod.db
hi16codOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hi16codORGANISM The Organism information for hi16cod
hi16codORGPKG The Organism information for hi16cod
hi16codPATH Mappings between probe identifiers and KEGG pathway identifiers
hi16codPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hi16codPFAM Map Manufacturer IDs to Pfam IDs
hi16codPMID Map between Manufacturer Identifiers and PubMed Identifiers
hi16codPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
hi16codPROSITE Map Manufacturer IDs to PROSITE ID
hi16codREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hi16codSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hi16codUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hi16codUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hi16codUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hi16cod_dbconn Collect information about the package annotation DB
hi16cod_dbfile Collect information about the package annotation DB
hi16cod_dbInfo Collect information about the package annotation DB
hi16cod_dbschema Collect information about the package annotation DB